code

• nodag Fortran code for structure learning without imposing acyclicity

• gclm R package to estimate sparse Lyapunov parametrization of covariance matrices

• gmat (Authors: I. Cordoba and G. Varando) R package to generate graphically constrained matrices.

• stagedtrees R package for staged event trees

Leaflet plugins and map visualization

• map-viewer an Atom package for visualizing map.json file.

• leaflet-map-builder

  leaflet plugin to build a leaflet map starting from a configuration object that can be easily stored in JSON format (see map.schema.json).demo

• leaflet-csvtiles

  leaflet plugin that load points from tiled csv files, using the amazing PapaParse library. demo

• leaflet-multilevel

  Multi level plugin for leaflet, the plugin define new methods for the Map object, a new control and new types of layers (L.layerName.ml). The plugin has been developed to visualize multi-slice maps for example created from bio images (confocal microscopy).demo

• map.schema.json JSON scheme for leaflet maps.

Old

A collection of old projects, probably not maintained

MultiMap

Application to visualize, edit and analyze spatial data. Developed using electrongui. download and user guide I am no longer directly developing MultiMap, if you want to use MultiMap capabilities I suggest you to use the electrongui app available for download here, then just manually install the extensions:

• mapextension
• imagejextension
• regionstatextension

Hopefully in the (distant) future, almost all capabilities of MultiMap will be replicated by the map-viewer atom package.

R packages

• Rbmop Density and conditional density estimation with B-spline.

• Rbnet Bayesian networks with B-spline densities.

ImageJ plugins

• ObjCounter ImageJ plugin for object segmentation and counting.

• MaxLoGs Maximum of Laplacian of Gaussian filters.

• MapTools An ImageJ plugin to create and visualize maps (tileLayers).

Node modules

• simple.graphs.js A simple simple graph utility in js

• gmat-js A js port of some algorithm in the gmat R package.

electrongui

electrongui is a skeleton for GUI written in JS/Node/electron framework. There is a partial online documentation.